| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,382,824 | (A)8→7 | coding (112/1212 nt) | elaD → | protease ElaD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,382,817 | 0 | A | . | 100.0% | 46.4 / NA | 12 | coding (105/1212 nt) | elaD | protease ElaD |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (5/7); total (5/7) | |||||||||||
TGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAAAT > NC_000913/2382740‑2382890 | tGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTaaa > 2:375982/1‑80 (MQ=255) tCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTaaaaa < 2:841453/80‑1 (MQ=255) cGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCgg < 1:375962/81‑1 (MQ=255) gCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCg > 2:375987/1‑79 (MQ=255) cTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGAt > 1:375984/1‑80 (MQ=255) gACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGc < 1:375963/81‑1 (MQ=255) cATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAt > 1:375990/1‑81 (MQ=255) aTTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCAtt < 2:375964/81‑1 (MQ=255) tGCAGAAAAATTTGCTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGa < 1:375965/80‑1 (MQ=255) tttACTGTGACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCata < 2:375966/81‑1 (MQ=255) tgtgACCGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATAtt > 2:375986/1‑81 (MQ=255) cGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTa < 1:375968/81‑1 (MQ=255) cGAGGAATTACTGCAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTa < 2:375967/81‑1 (MQ=255) cAGTCTTT‑AAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAAAt > 2:375995/1‑81 (MQ=255) | TGTCAATTATCTCAAACGCAACTCAGTCAGACATTTGCAGAAAAATTTACTGTGACCGAGGAATTACTGCAGTCTTTAAAAAAAACAGCGTTATCCGGAGATGAAGAAAGCATTGAGTTACTGCATAATATTGCGTTAGGTTATGATAAAT > NC_000913/2382740‑2382890 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |