| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,483,477 | (A)8→7 | intergenic (‑138/‑278) | emrK ← / → evgA | tripartite efflux pump membrane fusion protein EmrK/DNA‑binding transcriptional activator EvgA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,470 | 0 | A | . | 100.0% | 23.9 / NA | 7 | intergenic (‑131/‑285) | emrK/evgA | tripartite efflux pump membrane fusion protein EmrK/DNA‑binding transcriptional activator EvgA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (4/3); total (4/3) | |||||||||||
ATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTTGCAATACAATTCTTACGCCTGTAG > NC_000913/2483391‑2483527 | attcattcTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCaa < 2:392914/81‑1 (MQ=255) cattcTTCATATCAAACACAGTGCATGTGTTGCACATTATCTCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCaaaa > 2:392936/1‑80 (MQ=255) cattcTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCaaaa > 1:392944/1‑80 (MQ=255) tcATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCaaaaaaacaa > 2:392938/1‑77 (MQ=255) atatCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCaaaaaaacaa > 1:392935/1‑75 (MQ=255) tCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAgg < 2:392915/81‑1 (MQ=255) aaaCACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAGGAc < 2:392916/81‑1 (MQ=255) aTGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAGGACTAAACCGTGGc > 1:392952/1‑81 (MQ=255) gtTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAGGACTAAACCGTGGCtttt > 1:392940/1‑81 (MQ=255) tCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAGGACTAAACCGTGGCTTTTGCAATACAAt < 2:392917/80‑1 (MQ=255) ggAACGTTGGAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAGGACTAAACCGTGGCTTTTGCAATACAATTCTTAc > 1:392947/1‑81 (MQ=255) ggAGGCCTAATTTAAATGAGGTGC‑AAAAAAACAACAGAGGACTAAACCGTGGCTTTTGCAATACAATTCTTACGCCTGTAg > 1:392949/1‑81 (MQ=255) | ATTCATTCTTCATATCAAACACAGTGCATGTGTTGCACATTATCCCAGGAACGTTGGAGGCCTAATTTAAATGAGGTGCAAAAAAAACAACAGAGGACTAAACCGTGGCTTTTGCAATACAATTCTTACGCCTGTAG > NC_000913/2483391‑2483527 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |