| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,773,369 | (A)7→6 | coding (52/1704 nt) | yfjW → | CP4‑57 prophage; uncharacterized protein YfjW |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,773,363 | 0 | A | . | 100.0% | 36.9 / NA | 10 | coding (46/1704 nt) | yfjW | CP4‑57 prophage; uncharacterized protein YfjW |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (3/7); total (3/7) | |||||||||||
AAATCAACCTTAAAGGCTTTATACATGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTT > NC_000913/2773283‑2773434 | aaaTCAACCTTAAAGGCTTTATACATGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGCa < 1:446806/81‑1 (MQ=255) tAAAGGCTTTATACATGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGAc > 2:446825/1‑81 (MQ=255) aaGGCTTTATACATGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGACtt < 2:446807/81‑1 (MQ=255) aGGCTTTATACATGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGACttt < 1:446808/81‑1 (MQ=255) tGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGACTTTACGATCTTGGCa > 1:446829/1‑81 (MQ=255) cTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGACTTTACGATCTTGGCATTTTTCt < 2:446809/80‑1 (MQ=255) cTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTc < 2:446810/81‑1 (MQ=255) tCAGAAAGAGAAATTGTAAGAAAGATATTTAGC‑AAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTAtt < 2:446811/80‑1 (MQ=255) tAAGAAAGATATTTAGC‑AAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAg < 1:446812/81‑1 (MQ=255) aagaaagaTATTTAGC‑AAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGt > 1:446835/1‑81 (MQ=255) gaTATTTAGC‑AAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGtt < 2:446813/81‑1 (MQ=255) | AAATCAACCTTAAAGGCTTTATACATGGATTTGCTATGGCTTTTGTATCAGAAAGAGAAATTGTAAGAAAGATATTTAGCAAAAAAATTGACTTTACGATCTTGGCATTTTTCTATATTTCCTCTATTTTTTTTCTTCTTTGTAGTGGCGTT > NC_000913/2773283‑2773434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |