| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,989,488 | (A)8→7 | coding (185/483 nt) | yqeJ → | protein YqeJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,989,481 | 0 | A | . | 100.0% | 46.0 / NA | 12 | coding (178/483 nt) | yqeJ | protein YqeJ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (5/7); total (5/7) | |||||||||||
AACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATAC > NC_000913/2989403‑2989553 | aaCGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACaa > 2:489449/1‑80 (MQ=255) aCTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAg < 2:489443/81‑1 (MQ=255) gTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGt < 2:489444/81‑1 (MQ=255) ttAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTg > 1:489456/1‑80 (MQ=255) ttAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTg > 2:489467/1‑80 (MQ=255) aTGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAAc > 1:489474/1‑81 (MQ=255) aGCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGt < 2:489445/81‑1 (MQ=255) gCAAATCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTa < 2:489446/81‑1 (MQ=255) aaaTCTTACCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAAc < 1:489448/81‑1 (MQ=255) aCCATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGaa < 1:489449/80‑1 (MQ=255) cATCGACTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAg > 2:489470/1‑80 (MQ=255) aCTTTATGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAAt > 1:489477/1‑80 (MQ=255) tGTATAAC‑AAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATAc < 1:489450/80‑1 (MQ=255) | AACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCAAATCTTACCATCGACTTTATGTATAACAAAAAAAATAAAACAGGAACTGTTGCGTTGAGTGGAACCTGGCAACAAGGTAACAGAGAAAGTAAATCAATAC > NC_000913/2989403‑2989553 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |