| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 314,734 | Δ1 bp | pseudogene (378/888 nt) | eaeH → | putative porin domain‑containing protein EaeH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 314,732 | 0 | A | . | 100.0% | 54.9 / NA | 14 | pseudogene (376/888 nt) | eaeH | putative porin domain‑containing protein EaeH |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (11/3); total (11/3) | |||||||||||
CAGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGATAAAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTT > NC_000913/314658‑314805 | caGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGAttt > 1:65666/1‑81 (MQ=255) ccAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGAt > 1:65659/1‑81 (MQ=255) gAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGAttctt < 2:65640/81‑1 (MQ=255) aTACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGc > 2:65661/1‑81 (MQ=255) cAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTg > 2:65667/1‑80 (MQ=255) aGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTgg > 1:65657/1‑80 (MQ=255) ggCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCt > 1:65660/1‑81 (MQ=255) aaTATGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGAt > 2:65658/1‑81 (MQ=255) tatGGTACTGCGCGCGTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGAttt < 2:65641/81‑1 (MQ=255) gcgcgTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGcc > 1:65669/1‑80 (MQ=255) cgcgTCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGa > 1:65674/1‑81 (MQ=255) tCAAACTGAATGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACaaa > 2:65665/1‑81 (MQ=255) aTGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATgttgtt < 1:65642/81‑1 (MQ=255) aTGTCGAT‑AAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATgttgtt > 2:65662/1‑81 (MQ=255) | CAGCTAAAGCTAACCAGGAAATACAGGAGTGGCTCGGGAAATATGGTACTGCGCGCGTCAAACTGAATGTCGATAAAGATTTCTCGCTGAAGGATTCTTCGCTGGAAATGCTTTATCCGATTTATGATACGCCGACAAATATGTTGTT > NC_000913/314658‑314805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |