| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 642,100 | Δ1 bp | coding (13/1239 nt) | ybdR → | putative Zn(2(+))‑dependent alcohol dehydrogenase YbdR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 642,100 | 0 | A | . | 100.0% | 68.1 / NA | 17 | coding (13/1239 nt) | ybdR | putative Zn(2(+))‑dependent alcohol dehydrogenase YbdR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (8/9); total (8/9) | |||||||||||
GTTTTCCCGCTGTGATAGCTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTGACTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAGGCAGATGATATT > NC_000913/642024‑642171 | gTTTTCCCGCTGTGATAGCTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTAt > 1:126040/1‑81 (MQ=255) gtgATAGCTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCcaca > 1:126046/1‑81 (MQ=255) gCTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGt < 1:126012/81‑1 (MQ=255) cTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGtt < 1:126013/81‑1 (MQ=255) cTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGtt > 2:126042/1‑81 (MQ=255) cccTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTc < 2:126014/79‑1 (MQ=255) aaGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGa < 1:126015/80‑1 (MQ=255) aGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGaa > 2:126053/1‑80 (MQ=255) gactgactCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGaaaa > 2:126052/1‑81 (MQ=255) actgactCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAAt > 2:126037/1‑81 (MQ=255) ctctTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTcc < 1:126016/81‑1 (MQ=255) ttttGAACTGTCTCTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGAt < 1:126017/80‑1 (MQ=255) tctcTGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGtt < 2:126018/79‑1 (MQ=255) ctGGAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGaa > 2:126059/1‑79 (MQ=255) gAGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAgg < 1:126019/80‑1 (MQ=255) aGGTTGCATGAAAGCATTG‑CTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAgg > 1:126044/1‑79 (MQ=255) tGAAAGCATTG‑CTTAT‑ACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAGGCAGATGAtatt < 2:149548/81‑1 (MQ=255) | GTTTTCCCGCTGTGATAGCTACCCTTAAAGACTGACTCTTTTTTGAACTGTCTCTGGAGGTTGCATGAAAGCATTGACTTATCACGGCCCACATCACGTTCAGGTAGAAAATGTTCCCGATCCGGGCGTTGAACAGGCAGATGATATT > NC_000913/642024‑642171 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |