| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,302,297 | (A)6→7 | coding (1116/1632 nt) | oppA → | oligopeptide ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,302,291 | 1 | . | A | 100.0% | 38.3 / NA | 12 | A370A (GCG→GCA) | oppA | oligopeptide ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base A (5/7); total (5/7) | |||||||||||
ACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCG‑AAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTA > NC_000913/1302216‑1302353 | aCCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCG‑aaaaa < 2:229196/81‑1 (MQ=255) ccGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCG‑aaaaa > 2:229221/1‑80 (MQ=255) ataCTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCG‑aaaaaaactg > 1:229217/1‑77 (MQ=255) cTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAActgctg > 1:229220/1‑81 (MQ=255) tGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTgctgg > 2:229216/1‑81 (MQ=255) aTGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTgctggct < 1:229197/81‑1 (MQ=255) gcAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGc < 1:229198/81‑1 (MQ=255) aCTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTtata < 2:229200/80‑1 (MQ=255) aCTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTTATAc < 1:229199/81‑1 (MQ=255) aGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACa < 1:229201/81‑1 (MQ=255) tGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAAcc < 2:229202/81‑1 (MQ=255) ggCTGGAGCCAGGAAAAACGTAACGAAGATGCGAAAAAAACTGCTGGCTGAAGCGGGTAATACTGCAGACAAACCGTTGAc > 1:229218/1‑81 (MQ=255) gAGCCAGGAAAAACGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCa < 1:229203/81‑1 (MQ=255) aaaCGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGta > 1:229226/1‑81 (MQ=255) aaCGTAACGAAGAAGCGAAAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGta > 1:229222/1‑80 (MQ=255) | ACCGTATACTGATGGCGCAAAATTGACTCAGCCAGAATGGTTTGGCTGGAGCCAGGAAAAACGTAACGAAGAAGCG‑AAAAAACTGCTGGCTGAAGCGGGTTATACCGCAGACAAACCGTTGACCATCAACCTGTTGTA > NC_000913/1302216‑1302353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |