| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,838,080 | (T)7→8 | coding (869/1536 nt) | ynjC → | putative ABC transporter membrane subunit YnjC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,838,073 | 1 | . | T | 100.0% | 54.2 / NA | 16 | I288F (ATT→TTT) | ynjC | putative ABC transporter membrane subunit YnjC |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base T (7/9); total (7/9) | |||||||||||
GCAGCTGGCGGCGCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGA‑TTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTCGACGATCAAT > NC_000913/1837993‑1838144 | gcAGCTGGCGGCGCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCTACGCCTTTATTGCCGGGCAATACGCTGGCGa > 2:294532/1‑81 (MQ=255) ggcggcGCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGA‑tttttt > 2:294540/1‑81 (MQ=255) ggcgCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGA‑tttttttta > 2:294543/1‑79 (MQ=255) gcgcACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGA‑ttttttttac < 1:294512/81‑4 (MQ=255) gcgcACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGA‑ttttttttac < 2:294513/81‑4 (MQ=255) aCTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCt > 1:294537/1‑80 (MQ=255) ttCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAAcc < 1:294514/81‑1 (MQ=255) ttCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAAcc > 1:294533/1‑81 (MQ=255) cccGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGgt < 1:294515/81‑1 (MQ=255) gCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTctg > 1:294539/1‑81 (MQ=255) gCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTctg > 2:294538/1‑81 (MQ=255) gCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTct < 1:294516/80‑1 (MQ=255) ccACGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATc < 1:294517/81‑1 (MQ=255) cGCCTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTc < 1:294518/81‑1 (MQ=255) ccTTTATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTcgc > 2:294548/1‑81 (MQ=255) ttATTGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCCGa > 2:294547/1‑81 (MQ=255) ttGCCGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGAt > 2:294542/1‑79 (MQ=255) ccGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTc < 1:294520/81‑1 (MQ=255) ccGGGCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTc < 1:294519/81‑1 (MQ=255) ggCAATACGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTcgac < 1:294521/81‑1 (MQ=255) cGCTGGCGATTTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTCGACGATCAAt < 2:294522/81‑1 (MQ=255) | GCAGCTGGCGGCGCACTATTCCCCGCGTAGATGGCGTTCGCAAGCCTGCCACGCCTTTATTGCCGGGCAATACGCTGGCGA‑TTTTTTTACCCTTAACCGGTGTGCTGTGTGTGGTTCTGCTGGCGATCCTCGCGGATCAGTCGACGATCAAT > NC_000913/1837993‑1838144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |