| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 894,965 | C→A | intergenic (+69/‑26) | potF → / → potG | putrescine ABC transporter periplasmic binding protein/putrescine ABC transporter ATP binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 894,965 | 0 | C | A | 100.0% | 73.5 / NA | 21 | intergenic (+69/‑26) | potF/potG | putrescine ABC transporter periplasmic binding protein/putrescine ABC transporter ATP binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (13/8); total (13/8) | |||||||||||
GGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAC > NC_000913/894888‑895040 | ggAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGaaca > 2:169038/1‑81 (MQ=255) gAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGaacac < 2:169001/81‑1 (MQ=255) ataatCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACAtt > 1:169022/1‑80 (MQ=255) ccGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGc > 2:169041/1‑81 (MQ=255) cGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGcc < 1:169002/81‑1 (MQ=255) gTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGagag > 2:169040/1‑80 (MQ=255) aTGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGcc < 1:169003/81‑1 (MQ=255) aTGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGcc < 1:169004/81‑1 (MQ=255) gCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGt > 1:169043/1‑81 (MQ=255) ccGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGt < 2:169005/80‑1 (MQ=255) cGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTg > 2:169027/1‑80 (MQ=255) cGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTg > 2:169026/1‑80 (MQ=255) aGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAAt > 1:169034/1‑80 (MQ=255) caccacACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTAt > 1:169051/1‑81 (MQ=255) caccacACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTAt > 2:169037/1‑81 (MQ=255) cacaCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATccc < 2:169006/81‑1 (MQ=255) cacaCCCGCCGGCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATccc < 1:169007/81‑1 (MQ=255) gCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAgg < 2:169008/81‑1 (MQ=255) gCAATTCGCACCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAgg > 1:169033/1‑81 (MQ=255) aCCATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAAccc > 2:169036/1‑81 (MQ=255) ccATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCg > 2:169035/1‑81 (MQ=255) cATTATGGTGCGCTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCg > 1:169045/1‑80 (MQ=255) gcTTGAACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAc < 1:169009/81‑1 (MQ=255) | GGAAAATAATCCGCAGTCGTAGATGCCGGAGGGGCGCACCACACCCGCCGGCAATTCGCACCATTATGGTGCGCTTGCACACATTCAATGCCGGAGAGCAGCCGTGAATGACGCTATCCCTCGCCCGCAGGCGAAAACCCGTAAGGCGCTGAC > NC_000913/894888‑895040 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |