| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 970,141 | C→T | I251I (ATC→ATT) | ycaQ → | winged helix DNA‑binding domain‑containing protein YcaQ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 970,141 | 0 | C | T | 100.0% | 54.0 / NA | 16 | I251I (ATC→ATT) | ycaQ | winged helix DNA‑binding domain‑containing protein YcaQ |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (11/5); total (11/5) | |||||||||||
TGGCAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGC > NC_000913/970068‑970212 | tggcAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCtg > 1:181210/1‑81 (MQ=255) aCTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGtt > 2:181219/1‑80 (MQ=255) aTCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGaa > 2:181227/1‑80 (MQ=255) ggCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAAt > 2:181217/1‑81 (MQ=255) tGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGGGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTgg > 2:181238/1‑81 (MQ=255) cGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCttt < 1:181193/81‑1 (MQ=255) ggcggtGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCa > 2:181215/1‑81 (MQ=255) ggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCatga > 2:181214/1‑81 (MQ=255) ggcgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCatga > 2:181230/1‑81 (MQ=255) cgTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCatgatg < 2:181194/81‑1 (MQ=255) tGGCGCGAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATgatgat < 1:181195/81‑1 (MQ=255) gcgAAGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTtgc > 2:181220/1‑81 (MQ=255) aaGCGAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTtgctgc < 2:181196/81‑1 (MQ=255) gAGGGCTGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGc > 1:181223/1‑80 (MQ=255) tGAACAGCAGCAAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTc > 1:181226/1‑79 (MQ=255) gcagcaAATTATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCgagcgagc < 2:181197/81‑1 (MQ=255) | TGGCAGATTACTATCGGCTGAAACGTCCGGCACTGGCGGCGTGGCGCGAAGCGAGGGCTGAACAGCAGCAAATCATTGCTGTGCATGTTGAAAAATTGGGCAATCTTTGGCTGCATGATGATTTGCTGCCGCTACTCGAGCGAGC > NC_000913/970068‑970212 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |