| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,096,234 | C→G | P131R (CCG→CGG) | ycdU → | uncharacterized protein YcdU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,096,234 | 0 | C | G | 100.0% | 54.9 / NA | 17 | P131R (CCG→CGG) | ycdU | uncharacterized protein YcdU |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (6/11); total (6/11) | |||||||||||
TGAGTGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCCGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGAAAA > NC_000913/1096159‑1096308 | tGAGTGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTgg > 2:200549/1‑81 (MQ=255) aGTGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGt < 1:200527/80‑1 (MQ=255) tGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCAt < 1:200528/81‑1 (MQ=255) ggggCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGtt < 2:200529/81‑1 (MQ=255) gCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCg < 1:200530/81‑1 (MQ=255) ttCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCa > 1:200553/1‑81 (MQ=255) cTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCAc > 1:200558/1‑80 (MQ=255) gTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTAt < 1:200531/79‑1 (MQ=255) ttATATGCGCTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTc < 2:200532/81‑1 (MQ=255) cTGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTc < 1:200533/81‑1 (MQ=255) tGTTCCTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGTTCg > 2:200561/1‑81 (MQ=255) cTGATTTCGTTACTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTAtt < 2:200534/81‑1 (MQ=255) tttCGTTGCTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAg < 2:200535/81‑1 (MQ=255) aCTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGa > 1:200563/1‑80 (MQ=255) cTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGaaa < 2:200537/81‑1 (MQ=255) cTTGGGCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGaa < 1:200536/80‑1 (MQ=255) gggCGGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGaaag > 2:200560/1‑78 (MQ=255) | TGAGTGCAATGAGTTGGGGGCTATACCAGCTTCTACCCTCGTTATATGCGCTGTTCCTGATTTCGTTACTTGGGCCGTTGGTCATCTTTCTGCTGTTTCGGATGATCCGCACCAGTTATGTCAAGCAGGTCGCTATTTCAGTAGCGAAAA > NC_000913/1096159‑1096308 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |