| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,108,581 | G→A | P121S (CCT→TCT) | opgC ← | protein required for succinyl modification of osmoregulated periplasmic glucans |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,108,581 | 0 | G | A | 100.0% | 51.1 / NA | 15 | P121S (CCT→TCT) | opgC | protein required for succinyl modification of osmoregulated periplasmic glucans |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (8/7); total (8/7) | |||||||||||
GTAAAAACCACAGGTGTGATATTAATTCCCAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGGCCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTCAGTAGGGGGATGGCTG > NC_000913/1108512‑1108652 | gTAAAAACCACAGGTGTGATATTAATTCCCAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCg > 2:202219/1‑81 (MQ=255) aaaaaCCACAGGTGTGATATTAATTCCCAGGCCAACGTATTATATTTGTTATACAATGACAGCCCAGACCAACTTTCCGCt > 2:202222/1‑81 (MQ=255) aCCACAGGTGTGATATTAATTCCCAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTc > 1:202221/1‑81 (MQ=255) acaGGTGTGATATTAATTCCCAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCtt < 1:202192/81‑1 (MQ=255) atatTAATTCCCAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATAtt < 1:202193/81‑1 (MQ=255) cccAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCata < 1:202194/80‑1 (MQ=255) aGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCataata > 2:202217/1‑80 (MQ=255) gCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAAt > 1:202220/1‑81 (MQ=255) gCCAACGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTAACATATTGCAGCATAATAAAt < 1:202195/81‑1 (MQ=255) aaCGTATTATATTTGTCATACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGc < 2:202196/81‑1 (MQ=255) tatTTGTCATACAATGACAGCCCAGACCAACATTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTc < 2:202197/81‑1 (MQ=255) tACAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTCAGTAgggg > 2:202234/1‑80 (MQ=255) cAATGACAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTCAGTAGGGGGAt < 1:202198/81‑1 (MQ=255) aCAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTCAGTAGGGGGATGGCTg > 1:202225/1‑81 (MQ=255) aCAGCCCAGACCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTCAGTAGGGGGATGGCTg > 1:202226/1‑81 (MQ=255) | GTAAAAACCACAGGTGTGATATTAATTCCCAGGCCAACGTATTATATTTGTCATACAATGACAGCCCAGGCCAACTTTCCGCTTTTCCTTTGACATATTGCAGCATAATAAATTGCGGTAATGTCAGTAGGGGGATGGCTG > NC_000913/1108512‑1108652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |