| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,482,623 | A→G | L80L (TTG→CTG) | azoR ← | FMN dependent NADH:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,482,623 | 0 | A | G | 100.0% | 51.7 / NA | 16 | L80L (TTG→CTG) | azoR | FMN dependent NADH:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (3/13); total (3/13) | |||||||||||
CAACTGAGTCGAGATGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAACTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATCGCTCGGACGCAGAGCGCCAACCAGTT > NC_000913/1482546‑1482700 | cAACTGAGTCGAGATGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCt < 1:252331/80‑1 (MQ=255)cAACTGAGTCGAGATGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCt > 2:252359/1‑80 (MQ=255) aGTCGAGATGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGa < 2:252332/81‑1 (MQ=255) gagaTGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGt < 1:252334/81‑1 (MQ=255) gagaTGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGt < 2:252333/81‑1 (MQ=255) cGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGAcg > 2:252358/1‑81 (MQ=255) ggTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGAcgc < 1:252335/81‑1 (MQ=255) cGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGt < 2:252336/81‑1 (MQ=255) cAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCa < 2:252337/81‑1 (MQ=255) gataacgTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAgcggcg > 2:252349/1‑80 (MQ=255) taacgTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCAt < 1:252338/81‑1 (MQ=255) acgTCGTGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATc < 2:252339/80‑1 (MQ=255) gtcgtGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATCGCt < 1:252340/81‑1 (MQ=255) gtcgtGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATCGCt < 1:252341/81‑1 (MQ=255) gtGGGCTTTCAGCTCGGCAATCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATCGCTCgg < 2:252342/81‑1 (MQ=255) tCAGCTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATCGCTCGGACGCAGAGCGCCAACCAGtt < 1:252343/81‑1 (MQ=255) | CAACTGAGTCGAGATGTTGAAGTTATACATCGGTGCCGCAATAACGATAACGTCGTGGGCTTTCAGCTCGGCAATCAACTCATCGGAAAGTGCCAGAGCTTCCTGCTGACGCGGAGTCAGCGGCGCATCGCTCGGACGCAGAGCGCCAACCAGTT > NC_000913/1482546‑1482700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |