| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,508,541 | T→A | N587K (AAT→AAA) | rlhA → | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,508,541 | 0 | T | A | 100.0% | 60.5 / NA | 18 | N587K (AAT→AAA) | rlhA | 23S rRNA 5‑hydroxycytidine C2501 synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (10/8); total (10/8) | |||||||||||
GCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCGC > NC_000913/1508465‑1508616 | gCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCa < 2:255482/81‑1 (MQ=255)gCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCa < 2:255483/81‑1 (MQ=255) aGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAg > 2:255507/1‑81 (MQ=255) tgatgaTCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAgg > 1:255506/1‑81 (MQ=255) tgatCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGa < 1:255484/81‑1 (MQ=255) tCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGc < 1:255485/81‑1 (MQ=255) ccAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCaa > 1:255510/1‑81 (MQ=255) ccAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCaa > 1:255511/1‑81 (MQ=255) aGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATg > 2:255508/1‑80 (MQ=255) gTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTgg > 2:255512/1‑81 (MQ=255) gTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTg < 2:255486/80‑1 (MQ=255) aaTCTGTGCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGt < 2:255487/80‑1 (MQ=255) tgCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTaa < 1:255488/79‑1 (MQ=255) tgCCCGAAACAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACg > 2:255513/1‑81 (MQ=255) aaCAGGCGAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGt > 1:255514/1‑81 (MQ=255) gAAAGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTg > 1:255515/1‑81 (MQ=255) aGGCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTgccg < 1:255489/81‑1 (MQ=255) ggCAAAATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTgccgc > 1:255516/1‑81 (MQ=255) | GCGAAGTCCCGGTGATGATCACCAAGCATTGTCTGCGCTTTGCCTTTAATCTGTGCCCGAAACAGGCGAAAGGCAATATCAAAAGCTGGAAGGCGACGCCAATGCAACTGGTTAACGGCGATGAAGTATTAACGCTAAAGTTTGATTGCCGC > NC_000913/1508465‑1508616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |