| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,512,246 | T→G | V198G (GTT→GGT) | ydcS → | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,512,246 | 0 | T | G | 100.0% | 66.5 / NA | 20 | V198G (GTT→GGT) | ydcS | putative ABC transporter periplasmic binding protein/polyhydroxybutyrate synthase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (9/11); total (9/11) | |||||||||||
GCCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAA > NC_000913/1512169‑1512321 | gCCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTa > 1:255950/1‑80 (MQ=255) cGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCAc < 2:255927/81‑1 (MQ=255) ggCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACt > 1:255952/1‑81 (MQ=255) gCCGCGTTCAGGCTTGTGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCa < 2:255929/81‑1 (MQ=255) cgcgTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCAt > 2:255947/1‑80 (MQ=255) cTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCg > 1:255956/1‑80 (MQ=255) tgGCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACt < 2:255930/81‑1 (MQ=255) ggCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACt > 2:255960/1‑80 (MQ=255) gCCCTATCTATATTGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTc < 1:255931/80‑1 (MQ=255) ttGCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGt < 2:255932/81‑1 (MQ=255) gCGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTAc > 1:255955/1‑81 (MQ=255) cGGACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTAcc < 1:255933/81‑1 (MQ=255) gACGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAg < 1:255934/81‑1 (MQ=255) aCGCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAgg > 2:255957/1‑81 (MQ=255) cGCTGCGTTGTCCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGc < 1:255935/81‑1 (MQ=255) gCTGCGTTGTTCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCg < 2:255936/81‑1 (MQ=255) gttgttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCt > 1:255958/1‑81 (MQ=255) ttgttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCt > 2:255959/1‑80 (MQ=255) ttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGaa < 1:255938/80‑1 (MQ=255) ttCGGTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGaa < 2:255939/80‑1 (MQ=255) | GCCGGACGGCAAGAGCAATAAAGGCCGCGTTCAGGCTTATGATGGCCCTATCTATATTGCGGACGCTGCGTTGTTCGTTAAAGCCACTCAGCCGCAGTTGGGCATCAGCGATCCGTATCAACTCACCGAAGAACAGTACCAGGCGGTGCTGAA > NC_000913/1512169‑1512321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |