| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,572,102 | T→C | intergenic (‑57/+305) | gadB ← / ← pqqL | glutamate decarboxylase B/putative zinc peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,572,102 | 0 | T | C | 100.0% | 60.6 / NA | 18 | intergenic (‑57/+305) | gadB/pqqL | glutamate decarboxylase B/putative zinc peptidase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (2/16); total (2/16) | |||||||||||
CGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATA > NC_000913/1572025‑1572174 | cGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCaa < 1:263028/80‑1 (MQ=255) aTCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAgg < 1:263030/78‑1 (MQ=255) aTCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAgg < 2:263029/78‑1 (MQ=255) tAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGttt < 1:263031/80‑1 (MQ=255) aaCTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTaa < 1:263033/80‑1 (MQ=255) aaCTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTaa < 2:263032/80‑1 (MQ=255) tAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACaa > 1:263053/1‑80 (MQ=255) aTGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATcc < 1:263034/81‑1 (MQ=255) aTTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTaa < 1:263035/81‑1 (MQ=255) ttGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAAt < 1:263036/81‑1 (MQ=255) gATCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGtt < 2:263037/81‑1 (MQ=255) tCGCATTAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGttat < 1:263038/81‑1 (MQ=255) ttAAAAAAGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATc < 1:263039/81‑1 (MQ=255) aaaaaGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGt < 1:263040/80‑1 (MQ=255) aaaaaGTAGGATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGt < 2:263041/80‑1 (MQ=255) gATTTATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTAc > 2:263055/1‑81 (MQ=255) tATCGATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTAcgcg < 1:263042/80‑1 (MQ=255) gATAAAGCAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGaata < 1:263043/80‑1 (MQ=255) | CGTTACTTGCTTCTTATCCATTTTAAACTCCTTAAAATGATTGGATCGCATTAAAAAAGTAGGATTTATCGATAAAGTAAGCAAGTGCAAAGGACTCGTGTTTAAATAACAAAATCCTAATGTTATTTATCGTGAGATATTACGCGAATA > NC_000913/1572025‑1572174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |