| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,589,881 | G→A | L41F (CTT→TTT) | ydeT ← | fimbrial usher domain‑containing protein YdeT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,589,881 | 0 | G | A | 100.0% | 12.7 / NA | 5 | L41F (CTT→TTT) | ydeT | fimbrial usher domain‑containing protein YdeT |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/0); total (5/0) | |||||||||||
GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCT > NC_000913/1589819‑1589958 | gCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAACTGCTGAGAGATGCTTAt > 1:264834/1‑81 (MQ=255) tGGCACTGAAAAATGTCGTACCGTAATTTCCAAACTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGaa > 2:264836/1‑79 (MQ=255) gAAAAATGTCGTACCGTAATTTCCAAACTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTaa > 2:264831/1‑80 (MQ=255) aaTTTCCAAACTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATtgtg > 2:264835/1‑81 (MQ=255) cAAACTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCt > 1:264830/1‑81 (MQ=255) | GCGTGACGTGTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAACAGATTAAAATAATCAATAAATTGTGTCTGCT > NC_000913/1589819‑1589958 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |