| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,637,304 | C→T | I86I (ATC→ATT) | ydfO → | Qin prophage; protein YdfO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,637,304 | 0 | C | T | 100.0% | 38.5 / NA | 12 | I86I (ATC→ATT) | ydfO | Qin prophage; protein YdfO |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (8/4); total (8/4) | |||||||||||
ACATTGTGTCTGTCAAATTTTCAAAGGATAGGCATCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATCACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCACGAA > NC_000913/1637228‑1637373 | aCATTGTGTCTGTCAAATTTTCAAAGGATAGGCATCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATTACAt > 1:270116/1‑81 (MQ=255) cATTGTGTCTGTCAAATTTTCAAAGGATAGGCATCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATTACAtt < 1:270100/81‑1 (MQ=255) aTCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAg > 2:270121/1‑81 (MQ=255) tataGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGt > 1:270122/1‑81 (MQ=255) aaaCGACCTCTAATAAGCTGAAATCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTc > 1:270113/1‑81 (MQ=255) gCTGAAATCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAatat < 2:270101/81‑1 (MQ=255) cTGAAATCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATc > 1:270126/1‑81 (MQ=255) cTGAAATCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATc < 2:270102/81‑1 (MQ=255) aaaTCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCAc > 1:270115/1‑81 (MQ=255) aaaTCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCAc > 1:270118/1‑81 (MQ=255) aaTCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCAc > 2:270117/1‑80 (MQ=255) tCCAGAGAGATTACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCACGaa < 1:270103/81‑1 (MQ=255) | ACATTGTGTCTGTCAAATTTTCAAAGGATAGGCATCTTATAGAAACGACCTCTAATAAGCTGAAATCCAGAGAGATCACATTTCAGGAATACAGAAGAAACCTTGCTAAAGCAGGAGTTTTTCGGTGGGTTACAAATATCCACGAA > NC_000913/1637228‑1637373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |