| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,677,184 | T→C | E240E (GAA→GAG) | pntA ← | pyridine nucleotide transhydrogenase subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,677,184 | 0 | T | C | 100.0% | 58.8 / NA | 18 | E240E (GAA→GAG) | pntA | pyridine nucleotide transhydrogenase subunit alpha |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/10); total (8/10) | |||||||||||
CGGCGCTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGTTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATCGCCGCTGCCAGCTTCCTCTTTAAAA > NC_000913/1677112‑1677259 | cGGCGCTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCAttt < 1:274587/80‑1 (MQ=255) ggCGCTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTcc > 1:274607/1‑81 (MQ=255) ggCGCTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTcc > 1:274610/1‑81 (MQ=255) ggCGCTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTcc < 2:274588/81‑1 (MQ=255) gcgcTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCg < 1:274589/81‑1 (MQ=255) cTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCtt < 2:274590/81‑1 (MQ=255) gTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTtg < 1:274591/80‑1 (MQ=255) gAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAAcgc < 2:274592/79‑1 (MQ=255) cgcgGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACAt > 1:274616/1‑81 (MQ=255) gtgACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTg < 2:274593/81‑1 (MQ=255) gACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTgg > 1:274612/1‑80 (MQ=255) cAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCa > 2:274621/1‑80 (MQ=255) tatCGACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCAt < 2:274594/81‑1 (MQ=255) gACCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATcgcc > 2:274614/1‑81 (MQ=255) aCCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATcgccg < 1:274596/81‑1 (MQ=255) aCCTCTTTTGCCTGGGCGGCAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATcgccg < 1:274595/81‑1 (MQ=255) cggcAAAGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATCGCCGCTGCCAGCTTCCTCtt > 1:274617/1‑81 (MQ=255) aaGAGCTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATCGCCGCTGCCAGCTTCCTCTTTaaaa > 1:274613/1‑81 (MQ=255) | CGGCGCTGGTTTGCCTGGAATAAGCGCGGTGGTGACAATGATATCGACCTCTTTTGCCTGGGCGGCAAAGAGTTCCATTTCCGCTTTGATGAACGCGTCCGACATCACTTTGGCATAGCCATCGCCGCTGCCAGCTTCCTCTTTAAAA > NC_000913/1677112‑1677259 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |