Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,724,672	G→C	intergenic (‑17/+64)	sodC ← / ← ydhF	superoxide dismutase (Cu‑Zn)/putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,724,672	0	G	C	100.0%	61.8 / NA	19	intergenic (‑17/+64)	sodC/ydhF	superoxide dismutase (Cu‑Zn)/putative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (13/6);  total (13/6)

GCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAC  >  NC_000913/1724600‑1724744                                                                         |                                                                         gCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTcc                                                                  >  1:280354/1‑81 (MQ=255)         gcCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAg                                                          >  2:280349/1‑81 (MQ=255)            ggTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAgtgt                                                       <  1:280329/81‑1 (MQ=255)              ttGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTa                                                      >  2:280345/1‑80 (MQ=255)                 caacaaCCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAAc                                                   >  1:280352/1‑80 (MQ=255)                           cgcCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACAt                                        >  1:280363/1‑81 (MQ=255)                            gcCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACAtt                                       >  1:280346/1‑81 (MQ=255)                             ccAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACAttt                                      <  1:280330/81‑1 (MQ=255)                              cAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACAtctt                                     >  1:280351/1‑81 (MQ=255)                                gAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTg                                   <  1:280331/81‑1 (MQ=255)                                 aaTAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTg                                   >  1:280362/1‑80 (MQ=255)                                  aTAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGaa                                 >  1:280348/1‑81 (MQ=255)                                  aTAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGaa                                 <  2:280332/81‑1 (MQ=255)                                      ccAGACTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAAcggc                             >  2:280355/1‑81 (MQ=255)                                          aCTAAAACGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCt                         <  1:280333/81‑1 (MQ=255)                                             aaaaCGTTTCATAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTAtt                      >  2:280358/1‑81 (MQ=255)                                                       aTAGGACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTg            >  1:280350/1‑81 (MQ=255)                                                          ggACCTCCGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCt          >  2:280361/1‑80 (MQ=255)                                                                 cGTTCATTCTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAc  <  1:280334/81‑1 (MQ=255)                                                                         |                                                                         GCTTGTGCGCCGGTTGCAACAACCAGCGCCAGAATAGCCAGACTAAAACGTTTCATAGGACCTCCGTTCATTGTGCATTCCTGAATAAGTGTAAACCAGTGACACATTTTTGAACGGCGGCTATTCCTAAAAGTGCTTACGGTAC  >  NC_000913/1724600‑1724744

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑