| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,739,480 | T→C | T107A (ACA→GCA) | ydhB ← | putative LysR family DNA‑binding transcriptional regulator YdhB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,739,480 | 0 | T | C | 100.0% | 77.7 / NA | 23 | T107A (ACA→GCA) | ydhB | putative LysR family DNA‑binding transcriptional regulator YdhB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (12/11); total (12/11) | |||||||||||
CACCGTTGAACACTTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCT > NC_000913/1739402‑1739557 | cacCGTTGAACACTTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCAc < 1:282258/81‑1 (MQ=255) gAACACTTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTgg > 2:282285/1‑81 (MQ=255) acTTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTg < 1:282259/81‑1 (MQ=255) cTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAat < 2:282260/81‑1 (MQ=255) gAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAatat > 2:282293/1‑81 (MQ=255) aaaGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAAtatt < 2:282261/81‑1 (MQ=255) aaGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAAtatta > 1:282284/1‑81 (MQ=255) aaGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCACCTGCCGTGCACGTTCTGGCCTGACAAtatta > 2:282288/1‑81 (MQ=255) ttCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGa > 1:282287/1‑80 (MQ=255) ttCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGAt < 2:282262/81‑1 (MQ=255) ttCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGAt < 2:282263/81‑1 (MQ=255) cGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATa < 2:282264/80‑1 (MQ=255) catcaAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACt > 1:282280/1‑81 (MQ=255) atcaAAATGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACt < 2:282265/80‑1 (MQ=255) aaTGGCGATAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACcgc < 2:282266/81‑1 (MQ=255) aTAAAAATCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGcc > 2:282291/1‑81 (MQ=255) aTCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGc > 2:282295/1‑81 (MQ=255) tCAACGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCt < 2:282267/81‑1 (MQ=255) cGATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATct > 2:282290/1‑81 (MQ=255) gATCATCTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATctg < 2:282268/81‑1 (MQ=255) atcatcTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATctgc > 2:282294/1‑81 (MQ=255) catcTGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATctgct > 1:282283/1‑80 (MQ=255) tGCCGTGCACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACAt > 2:282292/1‑81 (MQ=255) gtgcACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCt > 2:282296/1‑81 (MQ=255) | CACCGTTGAACACTTCCTGAAAGACAAGAAGTTCGACATCATCAAAATGGCGATAAAAATCAACGATCATCTGCCGTGTACGTTCTGGCCTGACAATATTATCCACTGCGATAGCTAACTGACCGCGCCAGCCGTTCGCTATCTGCTGACATTGCT > NC_000913/1739402‑1739557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |