| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,812,996 | C→T | C46Y (TGC→TAC) | ydjO ← | protein YdjO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,812,996 | 0 | C | T | 100.0% | 12.1 / NA | 5 | C46Y (TGC→TAC) | ydjO | protein YdjO |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (3/2); total (3/2) | |||||||||||
ATAGTTAATGTTAGACATATAGGCAATCATATAATTAAAGTTTGATTCTGCTATTTCATCGCAGTCACATTGACCCGTTGATATAAAGAAAGTGAGTGCTGTCATAGTAGACTGCAGCCTTTCTTTAAAAGAGTCGA > NC_000913/1812935‑1813071 | atAGTTAATGTTAGACATATAGGCAATCATATAATTAAAGTTTGATTCTGCTATTTCATCGTAGTCACATTGACCCGTTGa > 1:291252/1‑81 (MQ=255) tGTTAGACATATAGGCAATCATATAATTAAAGTTTGATTCTGCTATTTCATCGTAGTCACATTGACCCGTTGATATaaag > 1:291251/1‑80 (MQ=255) tttGATTCTGCTATTTCATCGTAGTCACATTGACCCGTTGATATAAAGAAAGTGAGTGCTGTCATAGTAGACTGCAGCctt < 2:291241/81‑1 (MQ=255) aTCGTAGTCACATTGACCCGTTGATATAAAGAAAGTGAGTGCTGTCATAGTAGACTGCAGCCTTTCTTTAAAAGAGTCGa < 1:291242/80‑1 (MQ=255) aTCGTAGTCACATTGACCCGTTGATATAAAGAAAGTGAGTGCTGTCATAGTAGACTGCAGCCTTTCTTTAAAAGAGTCGa > 2:291258/1‑80 (MQ=255) | ATAGTTAATGTTAGACATATAGGCAATCATATAATTAAAGTTTGATTCTGCTATTTCATCGCAGTCACATTGACCCGTTGATATAAAGAAAGTGAGTGCTGTCATAGTAGACTGCAGCCTTTCTTTAAAAGAGTCGA > NC_000913/1812935‑1813071 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |