| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,819,073 | A→G | V25A (GTA→GCA) | csrA ← | carbon storage regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,819,073 | 0 | A | G | 100.0% | 41.4 / NA | 13 | V25A (GTA→GCA) | csrA | carbon storage regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (9/4); total (9/4) | |||||||||||
GCTGGTAGATCTCTTCACGGTGAACAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTACCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAGAATCAGCAT > NC_000913/2818999‑2819146 | gCTGGTAGATCTCTTCACGGTGAACAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCt > 1:455042/1‑80 (MQ=255) gATCTCTTCACGGTGAACAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTg < 2:455011/80‑1 (MQ=255) ttCACGGTGAACAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTGTCa < 1:455012/77‑1 (MQ=255) cACGGTGAACAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGa > 2:455050/1‑81 (MQ=255) cAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATccc > 2:455047/1‑81 (MQ=255) tcGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAggg > 1:455052/1‑81 (MQ=255) cGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGt > 2:455046/1‑81 (MQ=255) gggCATTTACGCCAATACGTACCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGtct < 2:455013/81‑1 (MQ=255) aCCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAg > 1:455043/1‑80 (MQ=255) aCCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAg > 1:455044/1‑80 (MQ=255) aCCTGGTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAg > 2:455048/1‑80 (MQ=255) gTTGCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAGAATc < 1:455014/79‑1 (MQ=255) gCCCTTTGCCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAGAATCAGCAt > 2:455045/1‑81 (MQ=255) | GCTGGTAGATCTCTTCACGGTGAACAGAAACTTCCTTCGGGGCATTTACGCCAATACGTACCTGGTTGCCCTTTACCCCTAAAACTGTCACGGTGACCTCATCCCCAATCATGAGGGTCTCACCAACTCGACGAGTCAGAATCAGCAT > NC_000913/2818999‑2819146 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |