Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,922,977	T→C	E3G (GAA→GGA)	yqcA ←	putative flavodoxin YqcA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,922,977	0	T	C	100.0%	75.3 / NA	23	E3G (GAA→GGA)	yqcA	putative flavodoxin YqcA
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (9/14);  total (9/14)

GCGGTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTTCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTT  >  NC_000913/2922902‑2923053                                                                            |                                                                             gcgGTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGcc                                                                         <  1:476096/81‑1 (MQ=255)   ggTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCAt                                                                       <  2:476098/81‑1 (MQ=255)   ggTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCAt                                                                       <  2:476097/81‑1 (MQ=255)           tCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGtttt                                                               <  1:476099/81‑1 (MQ=255)             gcttccgcttcTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTtc                                                              <  2:476100/80‑1 (MQ=255)                 ccgcttcTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACAAATTCCCGCCATACCGTTTTCTccc                                                          <  2:476101/80‑1 (MQ=255)                       cttcGGCCATTAACCGTGATTTCCCGCCCATGGTGCAGACAAAAAAACCATTCCCCGCCATACCGTTTTCTCCCTGGAt                                                     <  2:476102/79‑1 (MQ=255)                            gCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAAc                                              >  1:476135/1‑81 (MQ=255)                              cACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACt                                             >  2:476148/1‑80 (MQ=255)                                       tGAATTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCa                                   <  2:476103/81‑1 (MQ=255)                                         aaTTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATc                                 >  2:476138/1‑81 (MQ=255)                                          aTTCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATcc                                >  2:476144/1‑81 (MQ=255)                                           ttCCCGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCt                               <  2:476104/81‑1 (MQ=255)                                           ttCCCGTACATGGTGCCGACAAAAATACAAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCt                               <  1:476105/81‑1 (MQ=255)                                               cGTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGAcc                           >  2:476140/1‑81 (MQ=255)                                                gTACATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGAccc                          >  1:476134/1‑81 (MQ=255)                                                   cATGGTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGAt                       >  2:476146/1‑81 (MQ=255)                                                       gTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGgcg                   >  2:476133/1‑81 (MQ=255)                                                       gTGCCGACAAAAATACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGgc                    <  2:476106/80‑1 (MQ=255)                                                               aaaaaTACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAAc           <  1:476107/81‑1 (MQ=255)                                                                 aaaTACCAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTc         <  2:476108/81‑1 (MQ=255)                                                                       cAATTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCt   <  1:476109/81‑1 (MQ=255)                                                                        aaTTCCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCtt  >  2:476151/1‑81 (MQ=255)                                                                            |                                                                             GCGGTCAGAATCGCTTCCGCTTCTTCGGCCACTAACAGTGAATTCCCGTACATGGTGCCGACAAAAATACCAATTTCCGCCATACCGTTTTCTCCCTGGATTAGGAACTTATCTCTCCATCCTGACCCGATGGCGCACTGAACTCAACCCTT  >  NC_000913/2922902‑2923053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑