| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,989,382 | A→G | T27A (ACT→GCT) | yqeJ → | protein YqeJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,989,382 | 0 | A | G | 100.0% | 52.9 / NA | 16 | T27A (ACT→GCT) | yqeJ | protein YqeJ |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (14/2); total (14/2) | |||||||||||
ATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCA > NC_000913/2989307‑2989453 | attgattATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTg > 1:489457/1‑79 (MQ=255) ataAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGaaaaa < 1:489440/80‑1 (MQ=255) aaaaCTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGata > 1:489445/1‑80 (MQ=255) aCTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGatatat > 2:489453/1‑80 (MQ=255) tatttTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATg > 2:489463/1‑81 (MQ=255) ttttATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCaaa > 2:489452/1‑81 (MQ=255) tATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTg > 1:489461/1‑81 (MQ=255) cAGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTggg > 1:489451/1‑80 (MQ=255) aGTGGGTTTATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGt > 2:489465/1‑80 (MQ=255) tttATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAAtttt > 1:489458/1‑80 (MQ=255) ttATTCTCTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAAttttt > 1:489459/1‑80 (MQ=255) tctcTTCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGa > 2:489461/1‑81 (MQ=255) ttCACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGTAAATTGGGTAATTTTTAATGACCAg > 2:489464/1‑81 (MQ=255) cACTGTCTATTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAg < 2:489440/79‑1 (MQ=255) aTTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCa > 2:489462/1‑80 (MQ=255) aTTCTTACGCTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCa > 2:489471/1‑80 (MQ=255) | ATTGATTATAAAAAAAACTTATTATTTATTTTAGTTTTTATCAGTGGGTTTATTCTCTTCACTGTCTATTCTTACACTGCAGAAAAAATGATATATAACGAAACATGCACTGCAAATTGGGTAATTTTTAATGACCAGGGACGAGCA > NC_000913/2989307‑2989453 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |