| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,993,623 | A→T | intergenic (+153/‑15) | ygeH → / → ygeI | putative transcriptional regulator YgeH/protein YgeI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,993,623 | 0 | A | T | 100.0% | 47.2 / NA | 14 | intergenic (+153/‑15) | ygeH/ygeI | putative transcriptional regulator YgeH/protein YgeI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (6/8); total (6/8) | |||||||||||
ATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGG > NC_000913/2993546‑2993699 | atatTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTtaa > 1:489918/1‑80 (MQ=255) tatTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTtaaa > 1:489919/1‑80 (MQ=255) aCCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAggg < 1:489904/80‑1 (MQ=255) aTTGCAAGATATTTAAAATGCTCTAGAGTTGAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCtt < 2:489904/80‑1 (MQ=255) aTTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCt < 1:489906/79‑1 (MQ=255) cAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATg < 2:489906/80‑1 (MQ=255) aGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACt < 2:489907/81‑1 (MQ=255) ttAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATcc > 2:489916/1‑80 (MQ=255) aTGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATCCAATCgg < 1:489909/81‑1 (MQ=255) ttAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAAtt > 1:489916/1‑81 (MQ=255) atgTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAg < 2:489909/80‑1 (MQ=255) gTAAAGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGtt > 1:489921/1‑80 (MQ=255) aaGACCATTGGCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCaa < 2:489910/80‑1 (MQ=255) ggCCTGGACAATTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGaa > 1:489923/1‑81 (MQ=255) cAATTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACgg > 1:489922/1‑81 (MQ=255) aaTTTAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACggg > 1:489936/1‑81 (MQ=255) | ATATTCACCTTATTGCAAGATATTTAAAATGCTCTAGAGTTAAAAGTATGATGTAAAGACCATTGGCCTGGACAATTAAAAAAGGGAGCTTTATGACTAATCCAATCGGTATCAATAATTTATCTCAAAGTTCAAATATAGCGAATGCAACGGG > NC_000913/2993546‑2993699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |