| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 311,801 | G→A | intergenic (‑465/‑311) | ecpR ← / → ykgL | DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 311,801 | 0 | G | A | 100.0% | 50.4 / NA | 15 | intergenic (‑465/‑311) | ecpR/ykgL | DNA‑binding transcriptional dual regulator MatA/uncharacterized protein YkgL |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (8/7); total (8/7) | |||||||||||
GGGATAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATGCCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGTTCGG > NC_000913/311723‑311878 | gggATAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATAcc > 2:65233/1‑81 (MQ=255) tAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGcac < 2:65207/81‑1 (MQ=255) atatAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACaaaa > 1:65229/1‑81 (MQ=255) atgaGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGgtgt < 2:65208/81‑1 (MQ=255) aTTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCaa > 1:65235/1‑80 (MQ=255) aTTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCaa > 1:65242/1‑80 (MQ=255) aTTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAAt < 2:65209/81‑1 (MQ=255) aTCAGTAAGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGaa > 1:65240/1‑81 (MQ=255) aGATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCg > 2:65234/1‑80 (MQ=255) gATATTTTAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTa < 2:65210/81‑1 (MQ=255) ttttAATGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGt < 2:65211/80‑1 (MQ=255) aTGGATTAACATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCa > 2:65241/1‑81 (MQ=255) aCATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGTTc < 2:65212/80‑1 (MQ=255) aCATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGTTc < 2:65213/80‑1 (MQ=255) cATACCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGTTCgg > 1:65238/1‑81 (MQ=255) | GGGATAGAATATAAAACTATGATGAGCTGTCATTGAAGATGATTTGCCAATCAGTAAGATATTTTAATGGATTAACATGCCGCACAAAATGGTTACAGGTGTTCATTCCAATAAGTAATGGAAAATTGAACGGGCGTATGTACGTCATCTGTTCGG > NC_000913/311723‑311878 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |