Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	314,142	T→A	intergenic (‑337/‑215)	ykgP ← / → eaeH	putative oxidoreductase/putative porin domain‑containing protein EaeH

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	314,142	0	T	A	100.0%	35.7 / NA	11	intergenic (‑337/‑215)	ykgP/eaeH	putative oxidoreductase/putative porin domain‑containing protein EaeH
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (4/7);  total (4/7)

GTGAATTATTCACTGTCCGCAGAGTAAGAAATATAACTTAGGTATCTATTTAATGACTTGCACAAAAAGCTAAATTTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGCACTGGATATATT  >  NC_000913/314068‑314213                                                                           |                                                                        gTGAATTATTCACTGTCCGCAGAGTAAGAAATATAACTTAGGTATCTATTTAATGACTTGCACAAAAAGCTAAAATTTcc                                                                    <  1:65564/80‑1 (MQ=255)          tCACTGTCCGCAGAGTAAGAAATATAACTTAGGTATCTATTTAATGACTTGCACAAAAAGCTAAAATTTCCCCCataaat                                                           >  1:65585/1‑80 (MQ=255)                  cGCAGAGTAAGAAATATAACTTAGGTATCTATTTAATGACTTGCACAAAAAGCTAAAATTTCCCCCATAAATAAAAatat                                                   >  2:65587/1‑80 (MQ=255)                              aaTATAACTTAGGTATCTATTTAATGACTTGCACAAAAAGCTAAAATTTCCCCCATAAATAGAAATATAATCCCGCGCCCa                                      <  1:65565/81‑1 (MQ=255)                                        aGGTATCTATTTAATGACTTGCACAAAAAGCTAAAATTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCtg                              <  1:65566/79‑1 (MQ=255)                                                     aTGACTTGCACAAAAAGCTAAAATTTCCCCCATAAATAAAAATATAATCCCACGCCCAACCACCTGATGAGTGGCTATAg                <  2:65567/80‑1 (MQ=255)                                                      tGACTTGCACAAAAAGCTAAAATTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGc              <  2:65568/81‑1 (MQ=255)                                                             cacaAAAAGCTAAAATTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGCACTGGa        >  1:65591/1‑80 (MQ=255)                                                                 aaaaGCTAAAATTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGCACTGGatatat   <  1:65569/81‑1 (MQ=255)                                                                  aaaGCTAAAATTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGCACTGGatatat   >  1:65590/1‑80 (MQ=255)                                                                  aaaGCTAAAATTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGCACTGGATATAtt  <  1:65570/81‑1 (MQ=255)                                                                           |                                                                        GTGAATTATTCACTGTCCGCAGAGTAAGAAATATAACTTAGGTATCTATTTAATGACTTGCACAAAAAGCTAAATTTTCCCCCATAAATAAAAATATAATCCCGCGCCCAACCACCTGATGAGTGGCTATAGGCACTGGATATATT  >  NC_000913/314068‑314213

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑