| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,493,804 | T→C | intergenic (+55/‑207) | tsgA → / → nirB | putative transporter TsgA/nitrite reductase catalytic subunit NirB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,493,804 | 0 | T | C | 100.0% | 67.3 / NA | 20 | intergenic (+55/‑207) | tsgA/nirB | putative transporter TsgA/nitrite reductase catalytic subunit NirB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (6/14); total (6/14) | |||||||||||
CATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAAT > NC_000913/3493726‑3493873 | cATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCAc < 2:602237/81‑1 (MQ=255) tAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGt > 2:602260/1‑81 (MQ=255) aaCACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTg > 2:602268/1‑81 (MQ=255) ccTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCt < 1:602239/81‑1 (MQ=255) aTTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCtat < 2:602239/78‑1 (MQ=255) aTTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAAccc < 1:602241/80‑1 (MQ=255) aTTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAAccc < 1:602242/80‑1 (MQ=255) cATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCAtt > 2:602271/1‑81 (MQ=255) gCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTg > 2:602261/1‑81 (MQ=255) aCGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAt < 2:602243/81‑1 (MQ=255) aCGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAt < 1:602243/81‑1 (MQ=255) cACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTAttttt < 1:602245/81‑1 (MQ=255) cgtcgtCCGGCCTTTTCCTCTCTTTCCCCGCCACGTGCATCTATTTCTATAAACTCGCTCATTTTGTCTATTTTTTGcac > 2:602265/1‑80 (MQ=255) tcgtcCGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACaaa < 2:602245/81‑1 (MQ=255) cGGCCTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGa < 2:602246/81‑1 (MQ=255) cTTTTCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAata < 1:602248/81‑1 (MQ=255) ttCCTCTCTTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAatat < 1:602249/79‑1 (MQ=255) ctctctTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGAc < 1:602250/81‑1 (MQ=255) tctTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACa < 1:602251/79‑1 (MQ=255) tctTCCCCCGCCACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAAt > 1:602273/1‑81 (MQ=255) | CATAACACCCTGACCTCTCATTAATTGCTCATGCCGGACGGCACTATCGTCGTCCGGCCTTTTCCTCTCTTCCCCCGCTACGTGCATCTATTTCTATAAACCCGCTCATTTTGTCTATTTTTTGCACAAACATGAAATATCAGACAAT > NC_000913/3493726‑3493873 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |