| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 368,027 | A→G | F132L (TTT→CTT) | mhpR ← | DNA‑binding transcriptional activator MhpR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 368,027 | 0 | A | G | 100.0% | 67.7 / NA | 20 | F132L (TTT→CTT) | mhpR | DNA‑binding transcriptional activator MhpR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (12/8); total (12/8) | |||||||||||
GGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAGCGTGGACACATCTGTCGGC > NC_000913/367952‑368103 | ggCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATa < 2:75701/81‑1 (MQ=255) aaGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCgg < 1:75702/81‑1 (MQ=255) ggCCAGCCAGGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCt < 1:75703/81‑1 (MQ=255) gccagGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAAc < 1:75704/81‑1 (MQ=255) ggTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGt > 2:75742/1‑80 (MQ=255) aGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTg > 2:75739/1‑81 (MQ=255) ccGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGttt < 2:75705/81‑1 (MQ=255) gAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTcg < 1:75706/81‑1 (MQ=255) aGGCGGTTTTCAGAAG‑GGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTcgcg > 2:75737/1‑81 (MQ=255) cGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTa < 1:75707/81‑1 (MQ=255) gTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTac > 2:75750/1‑80 (MQ=255) tCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTAccacca > 2:75734/1‑81 (MQ=255) aGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCAt < 2:75708/80‑1 (MQ=255) aaGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTg > 2:75745/1‑80 (MQ=255) aCGTCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATc > 2:75758/1‑81 (MQ=255) tCGCCCGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAg > 2:75757/1‑81 (MQ=255) ccGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAGCGTg > 1:75752/1‑81 (MQ=255) ccGACCATTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAGCGTg > 1:75740/1‑81 (MQ=255) aTTGCCCGGTGAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAGCGTGGAcaca > 1:75753/1‑81 (MQ=255) gAAGGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAGCGTGGACACATCTGTCGGc > 1:75747/1‑80 (MQ=255) | GGCAAAAGGCCAGCCAGGTCAGGCCCGAGGCGGTTTTCAGAAGCGGCAAACGTCGCCCGACCATTGCCCGGTGAAAGGATAAGCGGCTGAAACGGTGAGTGGTTTCGCGTACCACCATTGCATCAACATCCAGCGTGGACACATCTGTCGGC > NC_000913/367952‑368103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |