| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,710,538 | G→T | intergenic (‑63/+261) | eptB ← / ← yhjX | Kdo2‑lipid A phosphoethanolamine 7''‑transferase/putative pyruvate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,710,538 | 0 | G | T | 100.0% | 91.5 / NA | 26 | intergenic (‑63/+261) | eptB/yhjX | Kdo2‑lipid A phosphoethanolamine 7''‑transferase/putative pyruvate transporter |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (10/16); total (10/16) | |||||||||||
ATTTGATGTATCTCATGCAAACAAACCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGGGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAGTGTG > NC_000913/3710460‑3710615 | aTTTGATGTATCTCATGCAAACAAACCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGa < 1:657415/81‑1 (MQ=255) gATGTATCTCATGCAAACAAACCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGaaaa < 1:657416/80‑1 (MQ=255) gATGTATCTCATGCAAACAAAACCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGaaaa < 1:657417/80‑1 (MQ=255) aTGCAAACAAACCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAgg < 1:657418/80‑1 (MQ=255) aTGCAAACAAACCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAg < 2:657418/79‑1 (MQ=255) aaacaaacCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGt > 2:657459/1‑80 (MQ=255) aacaaacCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCa < 1:657420/81‑1 (MQ=255) acaaacCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGt > 1:657450/1‑78 (MQ=255) caaacCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGt > 1:657462/1‑77 (MQ=255) aaacCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGa > 2:657467/1‑80 (MQ=255) cTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTa < 1:657421/81‑1 (MQ=255) gACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTaaaa > 1:657456/1‑81 (MQ=255) tGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACAcgcg < 2:657421/81‑1 (MQ=255) gATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACAcgcgc > 2:657462/1‑81 (MQ=255) acacCCTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAAt < 2:657422/81‑1 (MQ=255) cTGCTTAGTGGCTTTTCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAg > 1:657477/1‑79 (MQ=255) ttttCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCa > 2:657470/1‑79 (MQ=255) tCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAgg > 1:657470/1‑80 (MQ=255) tCAGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAgg < 2:657423/80‑1 (MQ=255) aGGCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGaa < 1:657425/81‑1 (MQ=255) gCCCGGCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGaaaa < 2:657425/81‑1 (MQ=255) ggCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAgtg < 2:657426/81‑1 (MQ=255) gCAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAgtgt < 1:657428/81‑1 (MQ=255) cAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAGtgtg < 1:657430/81‑1 (MQ=255) cAGTGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAGtgtg > 2:657464/1‑81 (MQ=255) cAGTGAAAAAGTGCGGAGGTAGTCAGAAAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAGtgtg < 1:657429/81‑1 (MQ=255) | ATTTGATGTATCTCATGCAAACAAACCCTGGACAAACAGGTGATAACACCCTGCTTAGTGGCTTTTCAGGCCCGGCAGGGAAAAAGTGCGGAGGTAGTCAGATAAGTAAAATCTACACGCGCGAATAAGTAGACCACAGCAAAGGGAAAAAGTGTG > NC_000913/3710460‑3710615 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |