| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,793,741 | A→G | intergenic (‑58/‑246) | htrL ← / → rfaD | protein HtrL/ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,793,741 | 0 | A | G | 100.0% | 45.5 / NA | 14 | intergenic (‑58/‑246) | htrL/rfaD | protein HtrL/ADP‑L‑glycero‑D‑mannoheptose 6‑epimerase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (11/3); total (11/3) | |||||||||||
ATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCA > NC_000913/3793664‑3793814 | aTTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTAc > 2:678959/1‑81 (MQ=255) gtggtgGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTg > 1:678963/1‑80 (MQ=255) gatgatTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTAtatta > 2:678955/1‑81 (MQ=255) ccATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGttat > 1:678955/1‑81 (MQ=255) aTTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGttattt < 1:678948/81‑1 (MQ=255) aaaaaGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATc < 2:678948/81‑1 (MQ=255) aGAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGaa > 2:678967/1‑81 (MQ=255) gAATTATATCATAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGaa > 1:678969/1‑80 (MQ=255) aTAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTa < 2:678949/81‑1 (MQ=255) tAAATATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTa > 1:678962/1‑80 (MQ=255) aaaTATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTa > 2:678958/1‑79 (MQ=255) aaTATTAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAg > 2:678972/1‑81 (MQ=255) ttAATAGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCAc > 1:678957/1‑80 (MQ=255) aGAATGTGTACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTca > 1:678977/1‑81 (MQ=255) | ATTGTGGTGGATGATTTCATTACTAATAAGACCATTAATATAAAAAAAGAATTATATCATAAATATTAATAGAATGTATACTGTATATTATCCATTCAAATGCTTCCGTTATTTATCATACATCGGAATATTGATACTAAAGCACTATTCA > NC_000913/3793664‑3793814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |