Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 389,984 | A→G | intergenic (‑257/‑267) | hemB ← / → yaiT | porphobilinogen synthase/putative autotransporter YaiT |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 389,984 | 0 | A | G | 100.0% | 38.0 / NA | 12 | intergenic (‑257/‑267) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/6); total (6/6) |
TGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTG > NC_000913/389911‑390046 | tGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTAt > 1:79993/1‑81 (MQ=255) ttattTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGgt < 1:79977/80‑1 (MQ=255) ttGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGgtttgtgttt > 1:79992/1‑81 (MQ=255) tttGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGata > 1:79994/1‑81 (MQ=255) tGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGAtttt > 1:79998/1‑81 (MQ=255) ctgctATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGc < 1:79978/81‑1 (MQ=255) taAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATg < 1:79979/80‑1 (MQ=255) taAATTGAATAATTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATg < 1:79980/80‑1 (MQ=255) aatTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAAc > 2:79991/1‑80 (MQ=255) atTAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACa < 2:79981/80‑1 (MQ=255) ttAAAACTTTGTTGCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACaaa < 2:79982/81‑1 (MQ=255) ttgttgCATATTCATAGGGTATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTg > 1:79995/1‑81 (MQ=255) | TGGTTATTATTTTTTGGAGTTTGGTTGCGCTGCTATAAATTGAATAATTAAAACTTTGTTGCATATTCATAGGATATTTATCTGGTTTGTGTTTGTGATATTTATTATGCGTATGCTTCAAAAACAAAATTATCTG > NC_000913/389911‑390046 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |