Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 390,136 | A→G | intergenic (‑409/‑115) | hemB ← / → yaiT | porphobilinogen synthase/putative autotransporter YaiT |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 390,136 | 0 | A | G | 100.0% | 44.4 / NA | 14 | intergenic (‑409/‑115) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (6/8); total (6/8) |
ATACTGTGCTTTTATGAATTTGATGCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAATAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGTTTTCTATGCATTGATAATTGA > NC_000913/390059‑390213 | aTACTGTGCTTTTATGAATTTGATGCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGagtaa > 1:80003/1‑81 (MQ=255) cTGTGCTTTTATGAATTTGATGCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAGTAAtt > 1:80005/1‑80 (MQ=255) cTTTTATGAATTTGATGCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAAcc < 1:79986/80‑1 (MQ=255) aTTTGATGCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGt < 2:79987/81‑1 (MQ=255) gaagCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGCACTTAGGGGAAAGAGTAATTGAACTATTCGTTTGTACCg > 2:80010/4‑81 (MQ=255) ttttCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAAt > 1:80011/1‑81 (MQ=255) tctcCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGt > 2:80009/1‑81 (MQ=255) aaTTATATATGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGcgcg < 1:79988/80‑1 (MQ=255) ttATATATGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGaaa > 1:80021/1‑81 (MQ=255) atatatGTCCACATTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAAc < 1:79989/80‑1 (MQ=255) caTTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGtttt < 1:79991/81‑1 (MQ=255) caTTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGtttt < 2:79990/81‑1 (MQ=255) aTTCGGACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGTTTTc < 2:79992/81‑1 (MQ=255) gACTTAGGGGAAAGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGTTTTCTATg > 2:80018/1‑80 (MQ=255) aaaGAGTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGTTTTCTATGCATTGATAAtt < 2:79993/81‑1 (MQ=255) agagTAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGTTTTCTATGCATTGATAATTGa > 1:80027/1‑81 (MQ=255) | ATACTGTGCTTTTATGAATTTGATGCGTGTTTTTCTCCATAAATTATATATGTCCACATTCGGACTTAGGGGAAAGAATAATTGAACCATTCGTCTGTAACGCAGCATAATCGTTAGCGCGAAACATAATATGTTTTCTATGCATTGATAATTGA > NC_000913/390059‑390213 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |