| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,251,346 | A→G | pseudogene (644/1581 nt) | yjbI → | pentapeptide repeats‑containing protein YjbI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,251,346 | 0 | A | G | 100.0% | 56.1 / NA | 17 | pseudogene (644/1581 nt) | yjbI | pentapeptide repeats‑containing protein YjbI |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (5/12); total (5/12) | |||||||||||
AACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCTGTTATGTTTGAT > NC_000913/4251271‑4251422 | aaCTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTc < 1:801870/80‑1 (MQ=255) tAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGtt < 1:801871/81‑1 (MQ=255) cgcgAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTtctgtc < 1:801873/80‑1 (MQ=255) cgcgAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTtctgtc < 2:801871/80‑1 (MQ=255) gcgAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTtctgtctg < 2:801873/81‑1 (MQ=255) aTGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCaa < 2:801874/81‑1 (MQ=255) aGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATc < 1:801876/80‑1 (MQ=255) aGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATc < 1:801877/80‑1 (MQ=255) gAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCa < 1:801878/80‑1 (MQ=255) aaTTCAAACTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCAtt > 1:801897/1‑80 (MQ=255) ttCAAACTTCGATAATTGTTATCTTTACGCTACGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATttat < 2:801878/81‑1 (MQ=255) aaCTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTaaa > 2:801899/1‑81 (MQ=255) aCTTCGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAAt > 1:801901/1‑81 (MQ=255) cGATAATTGTTATCTTTACGCTTCGCGCTTCACCAGGGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCg < 2:801879/79‑1 (MQ=255) aTAATTGTTATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAAtt < 1:801881/81‑1 (MQ=255) tATCTTTACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCt > 2:801902/1‑81 (MQ=255) tACGCTTCGCGCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCTGTTATg > 1:801899/1‑81 (MQ=255) cgcgCTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCTGTTATGTTTGAt > 1:801898/1‑80 (MQ=255) | AACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCATTTATTAAATCGAATTTGACAGCTGTTATGTTTGAT > NC_000913/4251271‑4251422 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |