| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,525,883 | G→A | intergenic (‑80/+223) | yjhI ← / ← sgcR | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhI/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator SgcR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,525,883 | 0 | G | A | 100.0% | 50.8 / NA | 15 | intergenic (‑80/+223) | yjhI/sgcR | KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator YjhI/KpLE2 phage‑like element; putative DNA‑binding transcriptional regulator SgcR |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (7/8); total (7/8) | |||||||||||
ATGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAA > NC_000913/4525805‑4525959 | aTGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATa < 1:867622/81‑1 (MQ=255) tGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATaa < 1:867624/81‑1 (MQ=255) gCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAat < 1:867625/80‑1 (MQ=255) tcctccTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAatgat > 2:867651/1‑81 (MQ=255) gCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACttt > 1:867649/1‑80 (MQ=255) aTAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGaataat > 1:867651/1‑80 (MQ=255) aTAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATg < 2:867625/81‑1 (MQ=255) gTGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAAt > 2:867653/1‑81 (MQ=255) tGGAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATc < 2:867626/81‑1 (MQ=255) gAAAATATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATcc < 2:867627/80‑1 (MQ=255) aaTATGCTTTGTTCAGCATGCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGaa > 1:867648/1‑81 (MQ=255) gCTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAAt > 1:867661/1‑80 (MQ=255) cTGAACCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATg < 1:867629/80‑1 (MQ=255) aaCCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGaa < 1:867630/81‑1 (MQ=255) aaCCATAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGaa > 2:867649/1‑81 (MQ=255) | ATGGCTCCTCCTTGCTCATGGAATAAATGGTATCGGCATTACATAGTGGAAAATATGCTTTGTTCAGCATGCTGAACCGTAATGATGTGATTAAATGTGATCTTGTACACACTTTGAATAATGAATCCAGAACAGCCACATTTAGTGAATGAGAA > NC_000913/4525805‑4525959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |