| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 577,009 | A→G | intergenic (‑184/‑389) | nmpC ← / → essD | DLP12 prophage; putative outer membrane porin NmpC/DLP12 prophage; putative phage lysis protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 577,009 | 0 | A | G | 100.0% | 34.2 / NA | 12 | intergenic (‑184/‑389) | nmpC/essD | DLP12 prophage; putative outer membrane porin NmpC/DLP12 prophage; putative phage lysis protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (4/8); total (4/8) | |||||||||||
ATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAA > NC_000913/576933‑577080 | aTTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGaataaaagtaaa < 2:114506/81‑1 (MQ=255) tttGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAaagtaaat < 1:114507/81‑1 (MQ=255) gtgAAGTAGATCTCTATTTTTATCTGAACTCTTCTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAATTCTa > 2:114527/1‑81 (MQ=255) tgAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTAGCTGAATAAAAGTAAAACTAt < 2:114508/81‑1 (MQ=255) gTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGc > 2:114532/1‑81 (MQ=255) tATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAAt < 2:114509/76‑1 (MQ=255) tttttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTtata < 2:114511/79‑1 (MQ=255) tttttATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATAtt < 1:114510/81‑1 (MQ=255) aaCTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGt < 2:114512/80‑1 (MQ=255) aCTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGtta < 2:114513/81‑1 (MQ=255) ttGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTc < 2:114514/79‑1 (MQ=255) tGGCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAAt > 1:114538/1‑81 (MQ=255) ggCTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCaa < 2:114515/79‑1 (MQ=255) cTGAATAAAAGTAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAAttt > 2:114537/1‑80 (MQ=255) aataaaagtaaaTCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTaa < 1:114516/79‑1 (MQ=255) | ATTTGTGAAGTAGATCTCTATTTTTATCTGAACTTTTTTCTATCGAATCCTATTCATGGCTCTTGGCTGAATAAAAATAAATCTATTAGCCAATTTATATTAACGGCTGTTATTTATAAGTGCTCTATAATTTGAAGGTTCAATTTAA > NC_000913/576933‑577080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |