| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 601,907 | C→T | intergenic (+50/‑52) | cusA → / → pheP | copper/silver export system RND permease/phenylalanine:H(+) symporter PheP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 601,907 | 0 | C | T | 100.0% | 61.7 / NA | 18 | intergenic (+50/‑52) | cusA/pheP | copper/silver export system RND permease/phenylalanine:H(+) symporter PheP |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (9/9); total (9/9) | |||||||||||
GCTGCACCGACATCGGGTACGGAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGG > NC_000913/601830‑601983 | gCTGCACCGACATCGGGTACGGAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTAc > 2:118663/1‑80 (MQ=255) cACCGACATCGGGTACGGAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTACTAAAt > 1:118662/1‑81 (MQ=255) cGACATCGGGTACGGAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGt > 2:118670/1‑80 (MQ=255) aTCGGGTACGGAAATAAAAGCAGGATACCCCGTTTAACCGTGCGGATTGTGTCTTGCGACGATGGGTACTAAATGTTaa > 2:118675/1‑79 (MQ=255) ggAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCt < 2:118644/81‑1 (MQ=255) gAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTc < 1:118645/81‑1 (MQ=255) aCCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGacaca > 1:118667/1‑80 (MQ=255) cccGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAg < 1:118646/81‑1 (MQ=255) aacGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGAGAAAgg < 2:118647/79‑1 (MQ=255) ccGTGTGGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGc < 1:118648/81‑1 (MQ=255) tgtgGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTg < 1:118649/81‑1 (MQ=255) tgGATTGTGTCTTGCGACGATGGGTACTAAATGTTAAAAAGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGaa < 2:118650/81‑1 (MQ=255) tgtCTTGCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAAcgcg > 2:118672/1‑81 (MQ=255) gCGACGATGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCa < 2:118651/78‑1 (MQ=255) gacgaTGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCg > 2:118673/1‑80 (MQ=255) gacgaTGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCg > 2:118678/1‑80 (MQ=255) gaTGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATc > 1:118677/1‑81 (MQ=255) tGGGTACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCgg < 2:118652/81‑1 (MQ=255) | GCTGCACCGACATCGGGTACGGAAATAAAAGCAGGATACCCCGTTTAACCGTGTGGATTGTGTCTTGCGACGATGGGCACTAAATGTTAAAAGGTGCCCCTCAACAAAAAAGACACACAGGGGAAAGGCGTGAAAAACGCGTCAACCGTATCGG > NC_000913/601830‑601983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |