| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 636,750 | G→A | S290F (TCC→TTC) | ybdO ← | putative LysR family DNA‑binding transcriptional regulator YbdO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 636,750 | 0 | G | A | 100.0% | 60.7 / NA | 18 | S290F (TCC→TTC) | ybdO | putative LysR family DNA‑binding transcriptional regulator YbdO |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (10/8); total (10/8) | |||||||||||
AATAAATAGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGGAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAG > NC_000913/636674‑636823 | aataaataGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGaaga < 1:125111/80‑1 (MQ=255) aataGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAacac > 1:125133/1‑80 (MQ=255) ataGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCa < 1:125112/81‑1 (MQ=255) gATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAat < 1:125113/81‑1 (MQ=255) aTGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAat > 1:125137/1‑80 (MQ=255) gAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAattat > 2:125131/1‑81 (MQ=255) aaaGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAattat < 1:125114/80‑1 (MQ=255) ttATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTaaa < 1:125115/81‑1 (MQ=255) ataGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAaag > 1:125129/1‑80 (MQ=255) tagtagCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAaagaa < 2:125116/81‑1 (MQ=255) tagtagCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAaag > 1:125124/1‑79 (MQ=255) agCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGAtt > 1:125139/1‑81 (MQ=255) gCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGAttt < 1:125117/81‑1 (MQ=255) tAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAg < 2:125118/80‑1 (MQ=255) atatCAAAAACTCTCATTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGt > 2:125134/1‑80 (MQ=255) aTTTAGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAgg < 1:125119/81‑1 (MQ=255) aGACGGTCAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAAc > 1:125132/1‑81 (MQ=255) cAATAAATCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGtt > 1:125136/1‑81 (MQ=255) aaaTCGGAAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAg > 1:125144/1‑81 (MQ=255) | AATAAATAGATGAAAGTTATAGTAGCTGTCTGTAGTTATATATCAAAAACTCTCATTTAGACGGTCAATAAATCGGGAGAACACCAAATTATTTAAAGAAGATTTATTATAGGAAATGTAAAGCTTTATTGAAGGTAACGGATGTTCTAG > NC_000913/636674‑636823 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |