| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,087,850 | (T)5→4 | coding (2008/2019 nt) | pgaB ← | poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,087,846 | 0 | T | . | 100.0% | 54.0 / NA | 14 | coding (1/1326 nt) coding (2012/2019 nt) | pgaC pgaB | poly‑N‑acetyl‑D‑glucosamine synthase subunit PgaC poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine N‑deacetylase and beta‑1,6 glycoside hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (7/7); total (7/7) | |||||||||||
ACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCATTTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATGCAGAA > NC_000913/1087766‑1087912 | aCCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCAt < 2:220320/81‑1 (MQ=255) aaaGTACGCTACGCATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCA‑TTTTCGGAt < 1:220321/80‑1 (MQ=255) cgctacgcATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCA‑TTTTCGGATACCAGGc > 2:220342/1‑81 (MQ=255) gcATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGa < 2:220322/81‑1 (MQ=255) cATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATAAGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGaa < 1:220323/81‑1 (MQ=255) aGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAAc > 2:220344/1‑81 (MQ=255) cATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGa < 2:220324/81‑1 (MQ=255) taataTAAAAAACGATACGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTc < 2:220325/81‑1 (MQ=255) aaaaCGATACGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAggttggt > 2:220356/1‑81 (MQ=255) aaaCGATACGATGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGTATAAGGTCTATTTCAggttggt > 1:220350/1‑80 (MQ=255) cgatacgatGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATg < 2:220326/81‑1 (MQ=255) cgatacgatGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATg > 2:220348/1‑81 (MQ=255) gatacgatGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATg > 1:220343/1‑80 (MQ=255) cgatGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATGCAGaa < 2:220327/81‑1 (MQ=255) gatGCGATTAATCA‑TTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATGCAGaa > 1:220349/1‑80 (MQ=255) | ACCAGAGTGAAAGTACGCTACGCATAGGGGTATGCATAACACCAGACATAATATAAAAAACGATACGATGCGATTAATCATTTTTCGGATACCAGGCTGTTGAAAACTCAGGACGAATAAGGTCTATTTCAGGTTGGTTATGCAGAA > NC_000913/1087766‑1087912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |