| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,197,711 | Δ1 bp | coding (527/705 nt) | ymfE ← | e14 prophage; uncharacterized protein YmfE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,197,709 | 0 | T | . | 100.0% | 10.4 / NA | 4 | coding (529/705 nt) | ymfE | e14 prophage; uncharacterized protein YmfE |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (0/4); total (0/4) | |||||||||||
TACCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAA > NC_000913/1197634‑1197778 | taCCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCAttgttt < 1:238183/81‑5 (MQ=255) aCCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCa‑ttgtttg > 1:238191/1‑81 (MQ=255) aaaaaGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCA‑TTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTa < 1:238184/81‑1 (MQ=255) aGACAGCAAAGAACCTTCAACATGAAAAATATCCA‑TTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATc < 1:238185/81‑1 (MQ=255) tGAAAAATATCCA‑TTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCaaa < 1:238186/81‑1 (MQ=255) aaaaaTATCCA‑TTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCaaaa < 1:238187/80‑1 (MQ=255) | TACCACTCACTGAGAATGATAAAATTACAAAAAAGAATAAAGACAGCAAAGAACCTTCAACATGAAAAATATCCATTTGTTTGCAAAAAAAGATTATTAGGAAGGAAATTAATGCAATTATCGAAAATTCAAAAAATATCCAAAA > NC_000913/1197634‑1197778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |