| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,490,954 | (T)5→4 | coding (53/531 nt) | cybB → | cytochrome b561 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,490,950 | 0 | T | . | 100.0% | 54.7 / NA | 14 | coding (49/531 nt) | cybB | cytochrome b561 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (10/4); total (10/4) | |||||||||||
AACGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACTCAT > NC_000913/1490871‑1491023 | aaCGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCtt > 2:281341/1‑81 (MQ=255) aCGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCtt < 1:281321/80‑1 (MQ=255) cGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCtttt < 2:281322/81‑1 (MQ=255) ggAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCtttta > 1:281348/1‑80 (MQ=255) aTTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGt > 1:281340/1‑81 (MQ=255) ttAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCg > 1:281350/1‑80 (MQ=255) aGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCg > 2:281339/1‑81 (MQ=255) gCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGt < 2:281323/81‑1 (MQ=255) cAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTa > 2:281344/1‑81 (MQ=255) aTGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTgcg > 2:281342/1‑80 (MQ=255) aataaataTTCAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTc < 2:281324/81‑1 (MQ=255) cAAGGTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTttctt > 1:281346/1‑81 (MQ=255) ggTTACAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTccc < 2:281325/81‑1 (MQ=255) cAAATCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACg > 1:281361/1‑79 (MQ=255) aaTCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGc > 2:281351/1‑81 (MQ=255) aTCAGCATTCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCg < 2:281326/81‑1 (MQ=255) ttCACTGGCTGGTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGc > 1:281357/1‑80 (MQ=255) gctggTC‑TTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACtcat > 2:281345/1‑80 (MQ=255) | AACGGAAAATTATGTTAAAGCAGGAAATGTTATGGAAAATAAATATTCAAGGTTACAAATCAGCATTCACTGGCTGGTCTTTTTACTGGTTATCGCAGCGTATTGCGCAATGGAGTTTCGTGGTTTCTTCCCACGTAGCGATCGGCCACTCAT > NC_000913/1490871‑1491023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |