| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,734,304 | (T)7→6 | intergenic (‑203/‑131) | grxD ← / → mepH | glutaredoxin 4/peptidoglycan DD‑endopeptidase MepH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,734,298 | 0 | T | . | 100.0% | 45.6 / NA | 12 | intergenic (‑197/‑137) | grxD/mepH | glutaredoxin 4/peptidoglycan DD‑endopeptidase MepH |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (7/5); total (7/5) | |||||||||||
TTGCATTTCAAATATTCGTTTCTTCTCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCATTTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCTCTTCTTCTATGC > NC_000913/1734219‑1734366 | ttgCATTTCAAATATTCGTTTCTTCTCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCAtt > 1:315178/1‑81 (MQ=255) cATTTCAAATATTCGTTTCTTCTCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCAttttt < 1:315152/81‑1 (MQ=255) cAAATATTCGTTTCTTCTCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCAttttttgcg < 1:315153/80‑4 (MQ=255) atTCGTTTCTTCTCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGc > 1:315172/1‑80 (MQ=255) cttctCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGaaa < 1:315154/80‑1 (MQ=255) ctctGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAAc < 1:315155/78‑1 (MQ=255) aTGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTAttttt < 1:315156/81‑1 (MQ=255) gCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTAtttttt > 2:315174/1‑80 (MQ=255) aaaCTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATa < 1:315157/81‑1 (MQ=255) aCCATTTTTAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGCATTTTTTAACAATAAAAGCTATTAACTTtct > 2:315184/1‑81 (MQ=255) ttttAGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCtcttct > 2:315176/1‑81 (MQ=255) aGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCTCTTCTTCTa > 1:315175/1‑81 (MQ=255) aGCTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCTCTTCTTCTa > 2:315179/1‑81 (MQ=255) cTTTCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCTCTTCTTCTATg > 1:315182/1‑81 (MQ=255) tCACTGCTGCA‑TTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCTCTTCTTCTATGc < 1:315158/79‑1 (MQ=255) | TTGCATTTCAAATATTCGTTTCTTCTCTGATGCCGGCAAACTGGCGTATTTATAACCATTTTTAGCTTTCACTGCTGCATTTTTTTGCGCTCGCCAACGAAACGTATTTTTTAACAATAAAAGCTATTAACTTTCTCTTCTTCTATGC > NC_000913/1734219‑1734366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |