| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,799,179 | Δ1 bp | intergenic (‑237/+47) | pheS ← / ← pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,799,177 | 0 | T | . | 100.0% | 71.8 / NA | 18 | intergenic (‑235/+49) | pheS/pheM | phenylalanine‑‑tRNA ligase subunit alpha/pheST‑ihfA operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (9/9); total (9/9) | |||||||||||
GCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCG > NC_000913/1799102‑1799252 | gCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCttcagg > 1:324784/1‑77 (MQ=255) acacCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGttt < 2:324766/80‑1 (MQ=255) cacCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTc < 2:324767/81‑1 (MQ=255) acCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTcc < 2:324768/81‑1 (MQ=255) gaCAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTttctctt > 1:324790/1‑81 (MQ=255) aCAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTttctcttc > 2:324799/1‑81 (MQ=255) cAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTttctcttct < 1:324769/81‑1 (MQ=255) aGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTttctcttctc < 2:324770/81‑1 (MQ=255) tttttATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCAcgc > 1:324800/1‑81 (MQ=255) ttttATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCAcgcg > 2:371357/1‑81 (MQ=255) tttttCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGc < 2:324771/81‑1 (MQ=255) tCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGcctc < 2:324772/80‑1 (MQ=255) cAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGcctcct > 1:324798/1‑81 (MQ=255) aaCGCGCATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGa > 2:324794/1‑81 (MQ=255) cgcATACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGAtt > 2:324792/1‑79 (MQ=255) aTACAAAAAAAGCCTCCACTGGGAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGt > 2:324805/1‑81 (MQ=255) ggAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGc < 1:324774/80‑1 (MQ=255) ggAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGc < 1:324773/80‑1 (MQ=255) gAGGC‑TTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCg > 2:324801/1‑80 (MQ=255) | GCGACAATTACACCTGATGAGACAGGCTTTTTATTTTTCAAAACGCGCATACAAAAAAAGCCTCCACTGGGAGGCTTTCAGGCGCTGTTTTCCGTTTCTCTTCTCACGCGCTAGCCTCCTGGATTCAGGTGCTAAAGTAAAAAAAGAAGCG > NC_000913/1799102‑1799252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |