| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,821,720 | (T)7→6 | intergenic (‑101/+198) | chbB ← / ← osmE | N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,821,714 | 0 | T | . | 100.0% | 45.6 / NA | 12 | intergenic (‑95/+204) | chbB/osmE | N,N'‑diacetylchitobiose‑specific PTS enzyme IIB component/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (6/6); total (6/6) | |||||||||||
CGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGT > NC_000913/1821634‑1821783 | cgacgaTTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCCGCTTCCACGTTCTGGGTAACTTGCGAAACCAACATGACt > 2:327795/1‑81 (MQ=255) tCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGACttttttgtg < 1:327783/80‑4 (MQ=255) aGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGaaa < 1:327785/81‑1 (MQ=255) aGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGa > 2:327797/1‑79 (MQ=255) cAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGa < 1:327786/81‑1 (MQ=255) gCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGta > 2:327796/1‑81 (MQ=255) aGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAg < 1:327787/81‑1 (MQ=255) ccTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGc < 1:327788/81‑1 (MQ=255) gCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCaa > 1:327805/1‑80 (MQ=255) cTTCCATGCTCTGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAAt < 1:327789/80‑1 (MQ=255) ctctGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCt > 1:327802/1‑81 (MQ=255) ctctGGGTAACTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCt < 2:327790/81‑1 (MQ=255) aaCTTGCGAAACCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCt > 1:327798/1‑80 (MQ=255) aaCCAACATGAC‑TTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGt > 2:327799/1‑81 (MQ=255) | CGACGATTATCTGTCAGCCAGACACTCCGCAAGCCTTAACCTGCTTCCATGCTCTGGGTAACTTGCGAAACCAACATGACTTTTTTTGTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGT > NC_000913/1821634‑1821783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |