| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,957,676 | Δ1 bp | coding (457/1101 nt) | torY ← | cytochrome c quinol dehydrogenase TorY |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,957,674 | 0 | T | . | 100.0% | 85.3 / NA | 21 | coding (459/1101 nt) | torY | cytochrome c quinol dehydrogenase TorY |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (7/14); total (7/14) | |||||||||||
TTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCAC > NC_000913/1957594‑1957749 | ttGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCt > 2:349075/1‑81 (MQ=255) cATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGc < 1:349046/81‑1 (MQ=255) cATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGc < 1:349045/81‑1 (MQ=255) ggCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCAGTCCTTTTGTGC‑TTGTTATGCATTTTCTgcg > 1:349081/1‑78 (MQ=255) aaTGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACt < 1:349047/81‑1 (MQ=255) aaTGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACt < 1:349048/81‑1 (MQ=255) gCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCg < 2:349049/81‑1 (MQ=255) cAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGc > 1:349076/1‑79 (MQ=255) aTGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAgg < 2:349050/81‑1 (MQ=255) tATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATc > 2:349084/1‑81 (MQ=255) aTGACAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGTATTTTCTGCGCAGATTCACTTTGCGAGGCAATATc < 1:349051/80‑1 (MQ=255) aCAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATg < 2:349052/81‑1 (MQ=255) cAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATgg > 1:349085/1‑81 (MQ=255) cAATCGATACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATgg < 2:349053/81‑1 (MQ=255) aTACAGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCa > 2:349082/1‑80 (MQ=255) aGGTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGa < 1:349054/81‑1 (MQ=255) gTTTCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAAt < 2:349055/81‑1 (MQ=255) ttCGCTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATgg > 2:349080/1‑81 (MQ=255) cTGTCCTTTTGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAAc < 1:349056/81‑1 (MQ=255) ttttGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACgg > 2:349079/1‑80 (MQ=255) ttGTGC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGc < 1:349057/79‑1 (MQ=255) tgtgC‑TTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCAc < 1:349058/80‑1 (MQ=255) | TTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCAC > NC_000913/1957594‑1957749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |