| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,273,494 | (A)6→5 | coding (1131/1815 nt) | yejA → | putative oligopeptide ABC transporter periplasmic binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,273,489 | 0 | A | . | 100.0% | 45.6 / NA | 12 | coding (1126/1815 nt) | yejA | putative oligopeptide ABC transporter periplasmic binding protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (6/6); total (6/6) | |||||||||||
GAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGAAAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCGT > NC_000913/2273410‑2273563 | gAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGa > 2:402394/1‑80 (MQ=255) aaCAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGaa > 1:402393/1‑80 (MQ=255) cAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGaaa > 1:402398/1‑79 (MQ=255) cAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGaaa > 2:402389/1‑79 (MQ=255) tttCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTAc > 1:402390/1‑81 (MQ=255) tttCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTAc > 2:402387/1‑81 (MQ=255) aGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTACCGTc < 1:402360/81‑1 (MQ=255) aaTACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTACCGt > 1:402388/1‑78 (MQ=255) ccAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAAt < 2:402361/81‑1 (MQ=255) aGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATc > 1:402402/1‑80 (MQ=255) aaaTTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTAc < 2:402362/81‑1 (MQ=255) aaaTTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTAc > 2:402407/1‑81 (MQ=255) cTTCTGGCACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCt < 1:402363/81‑1 (MQ=255) gCACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACg < 2:402364/78‑1 (MQ=255) cACCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCg < 1:402365/81‑1 (MQ=255) aCCAATG‑AAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCGt > 2:402415/1‑81 (MQ=255) | GAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCACCAATGAAAAAAGATCTACCGTCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCCAAAGGCGATGGCTACGATCGT > NC_000913/2273410‑2273563 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |