| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,667,617 | (A)6→5 | intergenic (‑37/+174) | gadA ← / ← ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,667,612 | 0 | A | . | 100.0% | 62.4 / NA | 16 | intergenic (‑32/+179) | gadA/ccp | glutamate decarboxylase A/cytochrome c peroxidase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (7/9); total (7/9) | |||||||||||
ATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATAAAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAG > NC_000913/3667536‑3667683 | aTCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATaaaaa < 2:712725/81‑1 (MQ=255) gAGTAGTTCTGAGCGTAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATaaaaag > 1:712751/1‑78 (MQ=255) ttCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGAttt < 2:712726/81‑1 (MQ=255) aTCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATgg > 2:712744/1‑80 (MQ=255) ttAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCaa < 1:712727/81‑1 (MQ=255) cTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTa < 1:712728/81‑1 (MQ=255) cTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTa < 2:712729/81‑1 (MQ=255) cTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTa > 1:917573/1‑81 (MQ=255) cTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTa > 1:712758/1‑81 (MQ=255) ggTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGc > 1:712743/1‑81 (MQ=255) ggTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGc > 2:712753/1‑81 (MQ=255) cATTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTa < 2:712730/80‑1 (MQ=255) aTTTCGAACTCCTTAAATTTATTTGAAGGCAAT‑‑AAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAAtt < 2:712731/81‑1 (MQ=255) tttCGAACTCCTTAAATTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAAtt > 1:712756/1‑81 (MQ=255) aaTTTATTTGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATc < 2:712732/81‑1 (MQ=255) tttatttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCt < 2:712733/81‑1 (MQ=255) atttGAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTaa < 2:712734/80‑1 (MQ=255) gAAGGCAAT‑AAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAg > 1:712754/1‑80 (MQ=255) | ATCGAGTAGTTCTGAGCGGAAATCCGTTAACAGCTTCTGGTCCATTTCGAACTCCTTAAATTTATTTGAAGGCAATAAAAAAGTAGGATTTATCCGCAATGGAAGCAAGGCATTACAGGCTTAATTTAAATAACAAAATCCTAAGCAG > NC_000913/3667536‑3667683 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |