| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,719,397 | Δ1 bp | intergenic (‑353/‑81) | yiaF ← / → yiaG | DUF3053 domain‑containing protein YiaF/putative DNA‑binding transcriptional regulator YiaG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,719,394 | 0 | C | . | 100.0% | 72.3 / NA | 18 | intergenic (‑350/‑84) | yiaF/yiaG | DUF3053 domain‑containing protein YiaF/putative DNA‑binding transcriptional regulator YiaG |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (12/6); total (12/6) | |||||||||||
TTATCAGATCGTTAGGTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCACCCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAGTGTGATTT > NC_000913/3719314‑3719465 | ttATCAGATCGTTAGGTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCAc > 2:726736/1‑81 (MQ=255) gATCGTTAGGTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCAcccgctg > 2:726735/1‑77 (MQ=255) gTTAGGTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTgtgt < 2:726701/80‑1 (MQ=255) aGGTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGc > 2:726728/1‑81 (MQ=255) ggTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCt > 1:726732/1‑81 (MQ=255) tGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCttt > 1:726731/1‑81 (MQ=255) tGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCttt > 2:726733/1‑81 (MQ=255) aCGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTc < 1:726702/81‑1 (MQ=255) aCGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTc > 2:726743/1‑81 (MQ=255) aCGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTc > 2:726734/1‑81 (MQ=255) aaTGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATg < 2:726703/81‑1 (MQ=255) atcgaatcATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCaa < 2:726704/81‑1 (MQ=255) atcATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCAc < 1:726705/81‑1 (MQ=255) atcATAGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCAc > 2:726706/1‑81 (MQ=255) aGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATcc > 2:726737/1‑81 (MQ=255) aGCCAGAGCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATcc > 1:726739/1‑81 (MQ=255) agCATGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAgt > 2:726740/1‑81 (MQ=255) aTGCCCTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAgtgt > 2:726741/1‑80 (MQ=255) ccTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAGTGTGAttt < 2:726707/81‑1 (MQ=255) ccTGACTTCA‑CCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAGTGTGAttt > 2:726746/1‑81 (MQ=255) | TTATCAGATCGTTAGGTGGCTATAAGTCACGCTAAATGACAGGCTGAATCGAATCATAGCCAGAGCATGCCCTGACTTCACCCCGCTGTGTCTGCTTTTCCCGACTATTCTTAATGAGCTTCGATGCAATTCACGATCCCGCAGTGTGATTT > NC_000913/3719314‑3719465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |