| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,799,102 | Δ1 bp | coding (211/1074 nt) | waaU ← | putative ADP‑heptose:LPS heptosyltransferase 4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,799,099 | 0 | T | . | 100.0% | 41.2 / NA | 11 | coding (214/1074 nt) | waaU | putative ADP‑heptose:LPS heptosyltransferase 4 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (5/6); total (5/6) | |||||||||||
TTCTTTAATACAGAACTCAAATATATTTTTATTATTAGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTATTTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGTTTATTATTAT > NC_000913/3799022‑3799170 | ttCTTTAATACAGAACTCAAATATATTTTTATTATTAGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTAttt > 2:747197/1‑80 (MQ=255) cAGAACTCAAATATATTTTTATTATTAGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTa < 2:747187/80‑1 (MQ=255) tatatTTTTATTATTAGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCa < 1:747188/81‑1 (MQ=255) tattattaGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATaaa < 1:747189/80‑1 (MQ=255) attattaGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAAt < 1:747190/80‑1 (MQ=255) agagagAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACt > 2:747203/1‑80 (MQ=255) gagagaAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACtt > 1:747199/1‑80 (MQ=255) gaAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATa > 2:747205/1‑80 (MQ=255) ccACCCTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATACAAt > 2:747200/1‑76 (MQ=255) ccTTTCTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCAcc < 1:747191/81‑1 (MQ=255) cTATTTGTGAGAAGAGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGt < 1:747192/80‑1 (MQ=255) gaagaGTTA‑TTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGTTtattattat > 1:747207/1‑80 (MQ=255) | TTCTTTAATACAGAACTCAAATATATTTTTATTATTAGAGAGAAATTCCCCACCCTTTCTATTTGTGAGAAGAGTTATTTTAACCCCTTTACTATAAAGTTCACGATAAATCGAACTTAATACAATTAGATCACCAAGTTTATTATTAT > NC_000913/3799022‑3799170 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |